D. van Sinderen
University College Cork
- Papers in database
- 58
- Years active
- 2002 – 2025
- Total publications
- 708
- Total citations
- 53,671
- h-index
- 112
- Health outcomes studied
- 2
Research Areas
- Probiotics and Fermented Foods
- Genomics and Phylogenetic Studies
- Gut microbiota and health
- Bacteriophages and microbial interactions
- Bacterial Genetics and Biotechnology
Health Outcomes Studied
Papers (58)
- 2025Vitamin biosynthesis in the gut: interplay between mammalian host and its resident microbiota.10.1128/mmbr.00184-23
- 2025Approaches to dissect the vitamin biosynthetic network of the gut microbiota.10.20517/mrr.2025.66
- 2023Molecular strategies for the utilisation of human milk oligosaccharides by infant gut-associated bacteria.10.1093/femsre/fuad056
- 2023Ability of Bifidobacterium breve 702258 to transfer from mother to infant: the MicrobeMom randomized controlled trial.10.1016/j.ajogmf.2023.100994
- 2023Bacteriophage-host interactions in Streptococcus thermophilus and their impact on co-evolutionary processes.10.1093/femsre/fuad032
- 2023Towards the diversification of lactococcal starter and non‐starter species in mesophilic dairy culture systems10.1111/1751-7915.14320
- 2023PBP2b Mutations Improve the Growth of Phage-Resistant Lactococcus cremoris Lacking Polysaccharide Pellicle10.1128/aem.02103-22
- 2023Identification of a prototype human gut Bifidobacterium longum subsp. longum strain based on comparative and functional genomic approaches10.3389/fmicb.2023.1130592
- 2022Evaluation of Modulatory Activities of Lactobacillus crispatus Strains in the Context of the Vaginal Microbiota10.1128/spectrum.02733-21
- 2022Comparative Genomics of Lactiplantibacillus plantarum: Insights Into Probiotic Markers in Strains Isolated From the Human Gastrointestinal Tract and Fermented Foods10.3389/fmicb.2022.854266
- 2021Biodiversity of Phages Infecting the Dairy Bacterium Streptococcus thermophilus.10.3390/microorganisms9091822
- 2021Plant Glycan Metabolism by Bifidobacteria10.3389/fmicb.2021.609418
- 2020Metabolism of biosynthetic oligosaccharides by human-derived Bifidobacterium breve UCC2003 and Bifidobacterium longum NCIMB 8809.10.1016/j.ijfoodmicro.2019.108476
- 2020The Infant-Derived Bifidobacterium bifidum Strain CNCM I-4319 Strengthens Gut Functionality10.3390/microorganisms8091313
- 2020Bifidobacterium breve UCC2003 Exopolysaccharide Modulates the Early Life Microbiota by Acting as a Potential Dietary Substrate10.3390/nu12040948
- 2019Bifidobacterial Dialogue With Its Human Host and Consequent Modulation of the Immune System10.3389/fimmu.2019.02348
- 2019Bifidobacterium bifidum: A Key Member of the Early Human Gut Microbiota10.3390/microorganisms7110544
- 2019Complete Genome Sequence of Lactococcus lactis subsp. cremoris 3107, Host for the Model Lactococcal P335 Bacteriophage TP901-110.1128/MRA.01635-18
- 2019Bifidobacterium bifidum and the infant gut microbiota: an intriguing case of microbe-host co-evolution.10.1111/1462-2920.14705
- 2019Isolation and Characterization of Lactobacillus brevis Phages10.3390/v11050393
- 2018Bifidobacterium breve UCC2003 Employs Multiple Transcriptional Regulators To Control Metabolism of Particular Human Milk Oligosaccharides10.1128/AEM.02774-17
- 2018Comparative genomics and genotype-phenotype associations in Bifidobacterium breve10.1038/s41598-018-28919-4
- 2018Genomic diversity and distribution of Bifidobacterium longum subsp. longum across the human lifespan10.1038/s41598-017-18391-x
- 2017Omics of bifidobacteria: research and insights into their health-promoting activities.10.1042/BCJ20160756
- 2017Comparative and functional genomics of the Lactococcus lactis taxon; insights into evolution and niche adaptation10.1186/s12864-017-3650-5
- 2017Host recognition by lactic acid bacterial phages.10.1093/femsre/fux019
- 2016Bifidobacteria and Their Role as Members of the Human Gut Microbiota10.3389/fmicb.2016.00925
- 2016Evaluation of genetic diversity among strains of the human gut commensal Bifidobacterium adolescentis10.1038/srep23971
- 2016Stable Engraftment of Bifidobacterium longum AH1206 in the Human Gut Depends on Individualized Features of the Resident Microbiome.10.1016/j.chom.2016.09.001
- 2016Bifidobacterium breve UCC2003 metabolises the human milk oligosaccharides lacto-N-tetraose and lacto-N-neo-tetraose through overlapping, yet distinct pathways10.1038/srep38560
- 2016Genome Analysis and Characterisation of the Exopolysaccharide Produced by Bifidobacterium longum subsp. longum 35624™10.1371/journal.pone.0162983
- 2016The Surface-Associated Exopolysaccharide of Bifidobacterium longum 35624 Plays an Essential Role in Dampening Host Proinflammatory Responses and Repressing Local TH17 Responses10.1128/AEM.02238-16
- 2015Discovery of a Conjugative Megaplasmid in Bifidobacterium breve10.1128/AEM.02871-14
- 2015Insights from genomes of representatives of the human gut commensal Bifidobacterium bifidum.10.1111/1462-2920.12743
- 2015Glycan cross-feeding activities between bifidobacteria under in vitro conditions10.3389/fmicb.2015.01030
- 2014Genomic Characterization and Transcriptional Studies of the Starch-Utilizing Strain Bifidobacterium adolescentis 22L10.1128/AEM.01993-14
- 2014The Lactococcus lactis plasmidome: much learnt, yet still lots to discover.10.1111/1574-6976.12074
- 2014Bifidobacterium bifidum as an example of a specialized human gut commensal10.3389/fmicb.2014.00437
- 2014Kefir fermented milk and kefiran promote growth of Bifidobacterium bifidum PRL2010 and modulate its gene expression.10.1016/j.ijfoodmicro.2014.02.024
- 2014Cross-feeding by Bifidobacterium breve UCC2003 during co-cultivation with Bifidobacterium bifidum PRL2010 in a mucin-based medium10.1186/s12866-014-0282-7
- 2014Metabolism of Sialic Acid by Bifidobacterium breve UCC200310.1128/AEM.01114-14
- 2014Identification of Restriction-Modification Systems of Bifidobacterium animalis subsp. lactis CNCM I-2494 by SMRT Sequencing and Associated Methylome Analysis10.1371/journal.pone.0094875
- 2013Evaluation of adhesion properties and antibacterial activities of the infant gut commensal Bifidobacterium bifidum PRL2010.10.1016/j.anaerobe.2013.03.003
- 2013Complete Genome of Lactococcus lactis subsp. cremoris UC509.9, Host for a Model Lactococcal P335 Bacteriophage10.1128/genomeA.00119-12
- 2013Comparative Genomics of Bifidobacterium animalis subsp. lactis Reveals a Strict Monophyletic Bifidobacterial Taxon10.1128/AEM.00984-13
- 2012Bifidobacterium breve UCC2003 surface exopolysaccharide production is a beneficial trait mediating commensal-host interaction through immune modulation and pathogen protection10.4161/gmic.20630
- 2011Complete Genome Sequence of Bifidobacterium animalis subsp. lactis BLC110.1128/JB.06079-11
- 2009Exploring the Diversity of the Bifidobacterial Population in the Human Intestinal Tract10.1128/AEM.02216-08
- 2009Bile-Inducible Efflux Transporter from Bifidobacterium longum NCC2705, Conferring Bile Resistance10.1128/AEM.00172-09
- 2008Lactobacillus hordei sp. nov., a bacteriocinogenic strain isolated from malted barley.10.1099/ijs.0.65584-0
- 2008Characterization of Endogenous Plasmids from Lactobacillus salivarius UCC11810.1128/AEM.02631-07
- 2007Complete Genome Sequence of the Prototype Lactic Acid Bacterium Lactococcus lactis subsp. cremoris MG136310.1128/JB.01768-06
- 2007Distribution of Megaplasmids in Lactobacillus salivarius and Other Lactobacilli10.1128/JB.00447-07
- 2006Comparative Genomics and Transcriptional Analysis of Prophages Identified in the Genomes of Lactobacillus gasseri, Lactobacillus salivarius, and Lactobacillus casei10.1128/AEM.72.5.3130-3146.2006
- 2006Polyphasic analysis indicates that Lactobacillus salivarius subsp. salivarius and Lactobacillus salivarius subsp. salicinius do not merit separate subspecies status.10.1099/IJS.0.64426-0
- 2006Comparative and Functional Analysis of Sortase-Dependent Proteins in the Predicted Secretome of Lactobacillus salivarius UCC11810.1128/AEM.03023-05
- 2006Multireplicon genome architecture of Lactobacillus salivarius.10.1073/PNAS.0511060103
- 2002Characterization of the genetic locus responsible for the production of ABP-118, a novel bacteriocin produced by the probiotic bacterium Lactobacillus salivarius subsp. salivarius UCC118.10.1099/00221287-148-4-973